CRP-DNA Complex
PRODORIC logo Release 8.9
  • © 2001-2008
    Version: 8.9
    Last Update: 2008-09-10
Statistics
Number of annotated publications:1068
Number of available genomes:696
Organism Binding Sites Genes1 Regulons PWMs2 Promoters Expression Profiles3
Aeropyrum pernix (strain K1) 1 - - - - -
Agrobacterium tumefaciens (strain C58 / ATCC 33970 / ATCC 33970 [Dupont]) - - - - 2 -
Bacillus subtilis (strain 168) 734 698 84 71 (53) 464 34 (2488)
Bradyrhizobium japonicum (strain USDA 110) 14 22 3 3 (3) 11 -
Corynebacterium glutamicum (strain DSM 20300 / ATCC 13032 / NCIB 10025 [Kalinowski]) 5 4 2 - 8 -
Escherichia coli O6 (strain UPEC / O6:H1 / ATCC 700928 / CFT073) - - - - - 2 (130)
Escherichia coli (strain K12) 1609 1015 81 84 (73) 721 57 (4444)
Escherichia coli (strain Sakai / O157:H7 / RIMD 0509952 / EHEC) - - - - - 1 (38)
Helicobacter pylori (strain ATCC 700392 / 26695) 9 11 2 2 (2) 9 -
Listeria monocytogenes (serovar 1/2a, strain EGD-e) 11 12 3 2 (2) 12 -
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1) 197 264 33 22 (19) 164 16 (1292)
Pseudomonas putida (strain KT2440) 7 14 6 - 10 2 (2)
Pseudomonas syringae (pathovar tomato, strain DC3000) 7 7 3 1 (1) 7 -
Rhizobium meliloti (strain 1021) 12 4 8 - 11 2 (198)
Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) 38 33 4 3 (3) 28 -
Salmonella typhimurium (strain ATCC 700720 / SGSC1412 / LT2) - - - - - 1 (93)
Salmonella typhi (strain ATCC 700931 / Ty2) - 1 - - 1 -
Salmonella typhi (strain CT18) 3 3 1 1 (1) 3 -
Staphylococcus aureus (strain COL) 83 18 4 - 13 -
Staphylococcus aureus (strain MRSA252) 9 8 2 - 5 -
Staphylococcus aureus (strain N315) 14 13 3 - 11 -
Streptococcus agalactiae (serovar III / III, strain NEM316) 4 3 1 1 (1) 3 -
Streptococcus pyogenes (serovar M18 / M18, strain MGAS8232) 10 6 1 2 (1) 4 -
Streptococcus pyogenes (serovar M1, strain SF370 / ATCC 700294) 3 2 2 1 (1) 3 1 (2)
Streptococcus pyogenes (serovar M4, strain MGAS10750) - - - - 1 -
Synechococcus sp. (strain PCC 7942) 13 6 2 - 13 -
Synechocystis sp. (strain PCC 6803) 11 8 2 - 24 6 (278)
Vibrio cholerae (serovar O1, strain El Tor N16961) - - - - - 1 (24)
Yersinia pseudotuberculosis (serovar I, strain IP32953) 8 2 2 - 3 -
Sum 2802 2154 249 193 (160) 1531 123 (8989)
Represents the non-redundant number of genes with corresponding transcriptions factor binding site(s). Operon structures are considered.
The number in parentheses is the non-redundant number of position weight matrices.
The value in parentheses is the sum of genes that are linked to the profiles

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