Release 8.9
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Search Expression Profile
Organism
Photorhabdus luminescens (subsp. laumondii, strain TT01)
Bacillus subtilis (strain 168)
Salmonella typhimurium (strain ATCC 700720 / SGSC1412 / LT2)
Escherichia coli (strain Sakai / O157:H7 / RIMD 0509952 / EHEC)
Synechocystis sp. (strain PCC 6803)
Streptococcus agalactiae (serovar V / V, strain 2603 V/R)
Escherichia coli O6 (strain UPEC / O6:H1 / ATCC 700928 / CFT073)
Escherichia coli (strain ATCC 27325 / DSM 5911 / W3110 / K12)
Vibrio cholerae (serovar O1, strain El Tor N16961)
Rhizobium meliloti (strain 1021)
Escherichia coli (strain K12)
Escherichia coli (strain UTI89 / UPEC)
Streptococcus pyogenes (serovar M1, strain SF370 / ATCC 700294)
Streptococcus pyogenes M1 (serovar M1, strain MGAS5005)
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1)
Please Select
Expression Profile
anaerobic growth
anaerobic growth (arcA mutant - WT)
anaerobic growth (wt vs. fnr mutant)
anaerobic induction (nitrate)
anaerobic induction (nitrite)
anaerobic induction (- pyruvate)
anaerobic induction (+ pyruvate)
antisense oligonucleotide microarray
antisense oligonucleotide microarray
bacitracin stress (15 min)
bacitracin stress (5 min)
BasS-BasR two-component system implicated in iron responses (basS-basR- dependend)
BasS-BasR two-component system implicated in iron responses (Fe and BasS-BasR induced)
biofilms (exponential phase)
biofilms exposed to imipenem (1 day)
biofilms exposed to imipenem (2 days)
biofilms exposed to imipenem (3 days)
biofilms (stationary phase)
biofilm vs. planktonic state (12 h)
biofilm vs. planktonic state (24 h)
biofilm vs.planktonic state (8 h)
bromo-furanone induced genes
codY-mutant vs. wt (DS- medium)
codY-mutant vs. wt (minimal medium)
comA-regulon
comK-mutant
Comparison of mucoid P.aeruginosa and reported enviromental biofilm gene expression
CRP- regulon - crp- mutant 1 in vitro
CRP- regulon - crp- mutant 2 in vitro
CRP-regulon - crp- mutant in vivo
CRP- regulon - wt in vitro
CRP-regulon - wt in vivo
csrR mutant vs. wildtype GBS strain
csrS mutant vs. wildtype GBS strain
degU-regulon
deoxyadenosine methyltransferase (Dam) mutant - aerobic and logarithmic phase
deoxyadenosine methyltransferase (Dam) mutant - aerobic and stationary phase
deoxyadenosine methyltransferase (Dam) mutant - low aerobic and logarithmic phase
deoxyadenosine methyltransferase (Dam) mutant - low aerobic and stationary phase
Differentially gene-expression in P.aeruginosa cultures
ECF (extracytoplasmic function) sigma factor AlgU-dependent gene expression in P.aeruginosa
Effect of osmotic up-shock (15 min. after up shock) on expression of genes associated with reulation or adaption and protection in P.aeruginosa PA14
Effect of osmotic up-shock (30 min. after up shock) on expression of genes associated with reulation or adaption and protection in P.aeruginosa PA14
Effect of osmotic up-shock (45 min. after up shock) on expression of genes associated with reulation or adaption and protection in P.aeruginosa PA14
Effect of osmotic up-shock (60 min. after up shock) on expression of genes associated with reulation or adaption and protection in P.aeruginosa PA14
Effect of osmotic up-shock on gene-expression (15 min. after addition) in the steady-state osmotic stress regulon of P.aeruginosa PA14
Effect of osmotic up-shock on gene-expression (60 min. after addition) in the steady-state osmotic stress regulon of P.aeruginosa PA14
elctronic mask - high stringency mask and K12 vs. CFT073
electronic mask - high stringency mask and K12 vs. 0157: H7
electronic mask - low stringency mask and K12 vs. 0157:H7
electronic mask - low stringency mask and K12 vs. CFT073
electronic mask . no mask and K12 vs. 0157:H7
electronic mask - no mask and K12 vs. CFT073
electronic mask - qRT-PCR and K12 vs. 0157:H7
electronic mask - qRT-PCR and K12 vs. CFT073
Expression analysis of mucoid (PAO578II) vs. nonmucoid (PAO6865) P.aeruginosa genes or operons related to alginate production
Expression analysis of mucoid (PAO578I) vs. nonmucoid (PAO381) P.aeruginosa genes or operons relatred to alginate production
FlhD/FlhC promoters (wt vs flhD mutant)
FlhD/FlhC promoters (wt vs flhD mutant (strain: MC1000))
gadE mutant vs. wildtype
Gene experssion during P.aeruginosa growth in CF sputum medium
Gene experssion during P.aeruginosa growth in SCFM
Gene-expression differentially regulated by osmotic stress 1
Gene-expression differentially regulated by osmotic stress 2
gene expression in biofilms - glass wool set 1
gene expression in biofilms - glass wool set 2
gene expression in biofilms - metal plates
Gene regulation by Tobramycin in P.aeruginosa biofilms
Global gene expression in mucoid (PAO578II) and nonmucoid (PAO381) P.aeruginosa strains
Global gene expression in mucoid (PAO578I) P.aeruginosa strain compared to its nonmucoid parent, PAO381
glucitol assimilation
glucose repression
glucose repression - ccpA1- mutant
glucose repression - wt
growth on L-idonate vs D-glucose
heat shock induction (10 min)
heat shock induction (20 min)
heat shock induction (3 min)
hfq-mutant vs.wt
hydrogen peroxide and high temperature - perR-mut.
hydrogen peroxide and high temperature - trxA1-mut.
hydrogen peroxide and high temperature - wt
hydrogen peroxide - treated wild- type vs. untreated wt.
hydrogen peroxide - wt
hydrogen peroxide - wt vs. oxyR mutant
hydrogen peroxide - wt vs. perR-mutant
hydrogen peroxide - wt vs. trxA1-mutant
hydrostatic pressure - 30MPa; early
hydrostatic pressure - 30 MPa; late
hydrostatic pressure - 50 MPa; early
hydrostatic pressure - 50 MPa; late
interfering with different steps of protein synthesis - relA- mutant + 4-azaleucine (AZL)
interfering with different steps of protein synthesis - relA- mutant + kasugamycin (KAS)
interfering with different steps of protein synthesis - relA- mutant + mupirocin (MUP)
interfering with different steps of protein synthesis - relA- mutant + puromycin (PRM)
interfering with different steps of protein synthesis - wt + 4-azaleucine (AZL)
interfering with different steps of protein synthesis - wt + kasamycin (KAS)
interfering with different steps of protein synthesis - wt + mupirocin (MUP)
interfering with different steps of protein synthesis - wt + puromycin (PRM)
In vivo coculture growth vs. in vivo monoculture growth
iron response
iron starvation
mannitol assimilation
minimal medium (MM) vs. minimal medium + amino acids (AAs)
Monoculture growth in vivo vs. growth in vitro
mucoid phenotype
mutant strain 0680 vs. wildtype (early logarithmic phase)
mutant strain 0680 vs. wildtype (late logarithmic phase)
mutant strain 0680 vs. wildtype (mid logarithmic phase)
mutant strain 0680 vs. wildtype (stationary phase)
mutant strain 07830vs. wildtype (stationary phase)
mutant strain 0785 vs. wildtype (late logarithmic phase)
mutant strain 0785 vs. wildtype (mid logarithmic phase)
mutant strain 0785 vs. wildtype (stationary phase)
mutant strain 0830 vs. wildtype (early logarithmic phase)
mutant strain 0830 vs. wildtype (late logarithmic phase)
mutant strain 0830 vs. wildtype (mid logarithmic phase)
mutant strain 1281vs. wildtype (early logarithmic phase)
mutant strain 1281vs. wildtype (late logarithmic phase)
mutant strain 1281vs. wildtype (mid logarithmic phase)
mutant strain 1281vs. wildtype (stationary phase)
nitrosative stress
PA01 vs pvdS mutant
P.aeruginosa genes differentially regulated during growth in CF sputum
P.aeruginosa genes essential for lung infection defective in virulence factors
P.aeruginosa genes essential for lung infection known previously as virulence factors and auxotrophs
P.aeruginosa growth in vivo vs. P.aeruginosa growth in vitro
PAO1-prsA::Tn-Gm muutant vs. wild-type
phoP-regulon
phoshate starvation (wt vs. phoB mutant)
phosphate starvation
plasma membrane adhesion
quorum- sensing (early stationary phase)
quorum- sensing (mid logarithmic phase)
quorum-sensing (wt vs. lasR-rhlR- mutant)
quorum-sensing (wt vs. rpoS- mutant)
response to acetate and propionate - acetate vs. LB
response to acetate and propionate - acetate vs. propionate
response to acetate and propionate - NaCl vs. LB
response to acetate and propionate - propionate vs. LB
rpoS-mutant under nitrogen starvation - after 10 h
rpoS-mutant under nitrogen starvation - after 3 h
rpoS-mutant under nitrogen starvation - after 7 h
seqA- and dam- mutant - dam- mutant vs. wt
seqA- and dam-mutant - seqA- mutant vs. wt
sigma-H-regulon - sigma-H-overexpression
sigma-H-regulon - wt vs.sigH-null-mutant
Spo0A overexpression
srv mutant vs. MGAS5005
srv mutant vs. MGAS5005
transcriptome during urinary tract infection (growth in human urine)
transcriptome during urinary tract infection (growth in vivo)
trxR mutant vs. wildtypeSPM5005
VqsR- regulon
wildtype vs. luxS deletion mutant
wildtype vs. luxS deletion mutant
wt vs aer mutant (strain: MC1000)
wt vs. algR-mutant
wt vs. algR-mutant (early stationary phase)
wt vs algR-mutant (overexpression)
wt vs. comK-mutant
wt vs.csrA-mutant
wt vs. evgA-mutant
wt vs. lrhA-mutant
wt vs. sigD-mutant (DSM medium)
wt vs. sigD-mutant (DSM medium)
wt vs. sigD-mutant (LB medium)
ycfR mutant vs. K12 wildtype
yncC deletion mutant vs. wildtyp
yncC mutant vs. K12 wildtype
Zinc stress
Name (all fields)
e.g. mutant
Release 8.9
